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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006756.1_2676_2806_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2676 - 2806

Intron Length:

131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

CGTGTCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGACAT

U12 Branch Point Sequence:

CCCTACGGGACA

Flanking Amino Acid:

RFRMEGSQLQVNTTLDYDSQ

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.8

43.8

Major BPS

43.9

-0.3

1.4

46.4

Major PPT

69.6

0.44

1.1

65.1

41.2

Minor 5ss

33.3

-1.9

2.8

39.7

45.9

Minor BPS

40.3

-0.7

2.2

47.41

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029927

Chromosome:

PEDO01006756.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047303

479 - 4943

4465