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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006756.1_3573_3663_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3573 - 3663

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGATGAA

U12 Branch Point Sequence:

GCAGGATGAAGC

Flanking Amino Acid:

RLCTVTVRLQAVPEPQCTPE

Intron Amino Acid Position:

545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.9

36.1

Major BPS

-0.1

1.3

37.5

42.1

Major PPT

71.8

0.49

0.8

65.7

30.3

Minor 5ss

29.6

-2.3

3.4

39.6

45.9

Minor BPS

35.1

-1.1

2.1

37.68

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029927

Chromosome:

PEDO01006756.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047303

479 - 4943

4465