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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006756.1_4294_4436_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4294 - 4436

Intron Length:

143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCCG

5'SS Class:

strong_major

3'SS Sequence:

GCTCCTCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

CTCACGGCCACT

Flanking Amino Acid:

LGCLAQSIACSSRAPSKPLL

Intron Amino Acid Position:

704

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

62.3

43.9

Major BPS

52.1

0.05

1.3

41.8

Major PPT

71.9

0.49

0.8

65.4

30.4

Minor 5ss

32.7

-2

39.3

46.1

Minor BPS

-1.2

2.7

51.97

48.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029927

Chromosome:

PEDO01006756.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047303

479 - 4943

4465