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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006810.1_4943_7691_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4943 - 7691

Intron Length:

2749

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAGTA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTCTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATTAA

U12 Branch Point Sequence:

GTAAAATTAAGG

Flanking Amino Acid:

GRGWPKDRVDWCCFNHDCCY

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

76.9

31.6

Major BPS

58.9

0.22

50.1

34.6

Major PPT

82.1

0.72

0.8

80.6

31.5

Minor 5ss

34.2

-1.8

3.5

44.1

44.7

Minor BPS

43.4

-0.6

2.1

48.56

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021833

Chromosome:

PEDO01006810.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028573

2088 - 8520

6433

ENSAPLT00000028630

4550 - 8520

3971