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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006830.1_1087_1206_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1087 - 1206

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

CTGGCCCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCCAT

U12 Branch Point Sequence:

TTTGCCATGATG

Flanking Amino Acid:

HSVTQPLVFRGMKIVPIPVL

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

76.2

28.3

Major BPS

62.2

0.3

1.4

72.5

43.5

Major PPT

67.8

0.4

0.9

57.8

38.5

Minor 5ss

35.2

-1.7

2.8

40.3

40.2

Minor BPS

56.5

0.06

1.8

67.34

40.8

Associated Gene:

Gene:

PNKD

Ensembl Gene ID:

ENSAPLG00000026030

Chromosome:

PEDO01006830.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033976

857 - 2560

1704

ENSAPLT00000021992

213 - 2514

2302

ENSAPLT00000039300

661 - 2514

1854