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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006830.1_1320_1510_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1320 - 1510

Intron Length:

191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACCC

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

TTTCCCCCAAAT

Flanking Amino Acid:

VDPSDPVAVQAAIEEEGVTL

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

68.6

36.5

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

69.4

0.44

61.9

39.9

Minor 5ss

27.8

-2.5

2.9

34.2

41.4

Minor BPS

53.9

0.2

80.66

40.1

Associated Gene:

Gene:

PNKD

Ensembl Gene ID:

ENSAPLG00000026030

Chromosome:

PEDO01006830.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039300

661 - 2514

1854

ENSAPLT00000033976

857 - 2560

1704

ENSAPLT00000021992

213 - 2514

2302