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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006830.1_1570_1786_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1570 - 1786

Intron Length:

217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGGGG

5'SS Class:

major

3'SS Sequence:

TCTGTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACCGAT

U12 Branch Point Sequence:

GGGCACCGATCT

Flanking Amino Acid:

LEAILCTHKHWDHSGGNAEL

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

60.5

44.3

Major BPS

49.4

-0

1.2

47.8

37.7

Major PPT

72.1

0.5

0.9

65.6

36.1

Minor 5ss

28.8

-2.4

3.5

34.5

43.8

Minor BPS

37.7

-0.8

1.9

50.44

42.1

Associated Gene:

Gene:

PNKD

Ensembl Gene ID:

ENSAPLG00000026030

Chromosome:

PEDO01006830.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039300

661 - 2514

1854

ENSAPLT00000033976

857 - 2560

1704

ENSAPLT00000021992

213 - 2514

2302