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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006830.1_2291_2423_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2291 - 2423

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CGCGTGGGTCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGTGAT

U12 Branch Point Sequence:

GCCCTGGTGATG

Flanking Amino Acid:

SGDLLFLAGCGRLFEGSPET

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

71.5

33.9

Major BPS

66.1

0.4

1.3

57.1

49.4

Major PPT

55.9

0.13

1.1

45.1

45.8

Minor 5ss

-2.5

33.3

41.7

Minor BPS

33.7

-1.4

2.3

30.94

35.5

Associated Gene:

Gene:

PNKD

Ensembl Gene ID:

ENSAPLG00000026030

Chromosome:

PEDO01006830.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033976

857 - 2560

1704