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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006830.1_425_970_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

425 - 970

Intron Length:

546

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGGCCGGT

5'SS Class:

weak_major

3'SS Sequence:

ACCCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTCAC

U12 Branch Point Sequence:

CCCCCCCCACCC

Flanking Amino Acid:

LPAAPARAVRWYRLYARTRL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.3

0.08

1.2

46.7

43.6

Major BPS

46.8

-0.2

1.4

48.8

46.3

Major PPT

64.6

0.33

0.8

54.2

30.2

Minor 5ss

36.9

-1.5

3.7

52.2

46.9

Minor BPS

39.8

-0.7

44.52

43.6

Associated Gene:

Gene:

PNKD

Ensembl Gene ID:

ENSAPLG00000026030

Chromosome:

PEDO01006830.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021992

213 - 2514

2302