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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006831.1_3362_4872_F


Intron Information:

Intron Rank:
1

Intron Class:
major-like

Intron Phase:
1

Intron Coordinates:
3362 - 4872

Intron Length:
1511

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
TAG|GCTTGTGCA

5'SS Class:
major

3'SS Sequence:
ACCACGATGGCAG|C

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
TAGTAAC

U12 Branch Point Sequence:
CCTCCCAGCACC

Flanking Amino Acid:
KRCRREDAKLALSKEYGYVI

Intron Amino Acid Position:
19

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77
0.64
1.2
69.5
39.9

Major BPS
66.7
0.42
1.2
67.6
36.5

Major PPT
53.5
0.08
1.1
46.8
39.6

Minor 5ss
25.1
-2.9
3.7
33.2
41.8

Minor BPS
43.1
-0.5
2.1
53.54
43.8

Associated Gene:

Gene:
MGST3

Ensembl Gene ID:

Chromosome:
PEDO01006831.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3307 - 6669
3363