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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006831.1_4983_5681_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4983 - 5681

Intron Length:
699

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGAGTCCT

5'SS Class:
strong_major

3'SS Sequence:
GTTTCTTTGACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTCAC

U12 Branch Point Sequence:
GTTTCTTTGACA

Flanking Amino Acid:
AKARKKYNVEYPTMYSTDPE

Intron Amino Acid Position:
56

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91
0.97
0.8
80.5
33.9

Major BPS
69.8
0.49
1.1
71.3
36.7

Major PPT
79.4
0.66
1
76
38

Minor 5ss
31.4
-2.1
2.9
42.1
44.5

Minor BPS
79.8
0.93
1
83.15
30.6

Associated Gene:

Gene:
MGST3

Ensembl Gene ID:

Chromosome:
PEDO01006831.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3307 - 6669
3363