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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006831.1_836_1875_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

836 - 1875

Intron Length:

1040

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGAAAC

U12 Branch Point Sequence:

GGCAAAAGAACC

Flanking Amino Acid:

WMAGSNVHFPDADNITCYTP

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.6

41.7

Major BPS

49.8

-0

1.2

36.4

Major PPT

0.81

0.7

80.8

24.4

Minor 5ss

24.7

-2.9

28.6

43.8

Minor BPS

36.7

-1

1.8

41.67

36.9

Associated Gene:

Gene:

LRRC52

Ensembl Gene ID:

ENSAPLG00000027394

Chromosome:

PEDO01006831.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029916

21 - 2281

2261