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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006848.1_3899_4308_R

Intron Information:

Intron Rank:

142634

Intron Class:

major

Intron Phase:

Intron Coordinates:

3899 - 4308

Intron Length:

410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TGTCTTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCGGAC

U12 Branch Point Sequence:

TTGGGTCGGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

74.7

41.5

Major BPS

45.5

-0.2

1.4

42.8

41.8

Major PPT

86.2

0.81

0.8

80.9

31.1

Minor 5ss

41.3

-1

2.8

52.3

44.3

Minor BPS

40.1

-0.6

2.1

59.86

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024005

Chromosome:

PEDO01006848.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029560

3394 - 4836

1443