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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006860.1_6973_7065_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6973 - 7065

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGGACG

5'SS Class:

major

3'SS Sequence:

GCTCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

GGCCGCTGACCA

Flanking Amino Acid:

YAGTELFRSLGCHELVGSIF

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

57.9

46.7

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

68.3

0.41

0.8

58.1

33.1

Minor 5ss

30.7

-2.2

3.3

31.9

42.4

Minor BPS

41.2

-0.6

47.25

42.2

Associated Gene:

Gene:

RORC

Ensembl Gene ID:

ENSAPLG00000021217

Chromosome:

PEDO01006860.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047867

4770 - 8288

3519

ENSAPLT00000022619

4770 - 8288

3519