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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006891.1_3974_4450_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3974 - 4450

Intron Length:

477

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAA|GCATACAGG

5'SS Class:

weak_major

3'SS Sequence:

TTTTATGGTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTGGAAAA

Flanking Amino Acid:

VGNFSSSISLKMSFKIHEKL

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.1

0.19

1.3

50.9

45.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.7

0.62

72.4

42.2

Minor 5ss

35.6

-1.6

47.4

Minor BPS

45.4

-0.3

2.1

60.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006695

Chromosome:

PEDO01006891.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023345

775 - 5238

4464