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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006891.1_4745_5201_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4745 - 5201

Intron Length:

457

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGGCTATG

5'SS Class:

weak_major

3'SS Sequence:

ATGAGGTTCTTAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TAATGCAAAAAA

Flanking Amino Acid:

ILIQFVILIPLRNVYHLFAD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.8

0.18

1.3

61.7

44.4

Major BPS

0.82

0.8

24.9

Major PPT

59.1

0.21

54.6

45.1

Minor 5ss

40.5

-1.1

3.1

54.4

43.3

Minor BPS

42.2

-0.5

2.2

55.9

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006695

Chromosome:

PEDO01006891.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023345

775 - 5238

4464

ENSAPLT00000006963

3228 - 5238

2011