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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006933.1_2739_3277_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2739 - 3277

Intron Length:

539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TTGTCACTAAGC

Flanking Amino Acid:

NTSLLVNIPQASPTSIKGTT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

81.7

0.71

0.8

73.6

36.9

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

49.1

-0

2.2

68.32

42.9

Associated Gene:

Gene:

GATAD2A

Ensembl Gene ID:

ENSAPLG00000018248

Chromosome:

PEDO01006933.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042014

21 - 4311

4291