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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006933.1_483_1304_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

483 - 1304

Intron Length:

822

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCTTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTTAC

U12 Branch Point Sequence:

CCTGTCTTACCG

Flanking Amino Acid:

PIVQHHSLKQTSSQMSRGPG

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

63.8

0.34

1.2

57.4

41.4

Major PPT

71.8

0.49

64.9

41.2

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

49.5

-0.1

1.9

53.66

47.7

Associated Gene:

Gene:

GATAD2A

Ensembl Gene ID:

ENSAPLG00000018248

Chromosome:

PEDO01006933.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042014

21 - 4311

4291