Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006935.1_8217_8335_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8217 - 8335

Intron Length:

119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CATCTCGTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

CAGCTCTGAGCG

Flanking Amino Acid:

QVLEHPWVQGCAPDNTLPTP

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

74.9

35.3

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

75.8

0.58

0.9

36.7

Minor 5ss

29.4

-2.4

3.1

33.3

41.7

Minor BPS

43.9

-0.6

1.7

42.55

42.3

Associated Gene:

Gene:

MKNK2

Ensembl Gene ID:

ENSAPLG00000022276

Chromosome:

PEDO01006935.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021067

6623 - 8890

2268