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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006997.1_1082_2297_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1082 - 2297

Intron Length:

1216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCGTTAC

U12 Branch Point Sequence:

CGTTACCTGACG

Flanking Amino Acid:

ILESIILQTLGFEITIDHPH

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

87.9

29.3

Major BPS

58.9

0.22

1.3

51.3

43.9

Major PPT

82.6

0.73

0.8

73.6

36.9

Minor 5ss

45.7

-0.5

2.8

45.5

Minor BPS

48.4

-0.2

57.46

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022799

Chromosome:

PEDO01006997.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030958

895 - 3887

2993