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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006997.1_16931_17037_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
16931 - 17037

Intron Length:
107

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAACCCCT

5'SS Class:
major

3'SS Sequence:
GTGTCCCCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ACCTCAG

U12 Branch Point Sequence:
CCAACCTCAGCC

Flanking Amino Acid:
TIINRLVEAEVHRLVVVDES

Intron Amino Acid Position:
416

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75
0.59
1.2
66.3
45.2

Major BPS
49.8
-0
1.5
59.3
39.1

Major PPT
68.6
0.42
0.9
58.8
38.3

Minor 5ss
46.1
-0.4
2.9
66.6
44.3

Minor BPS
46.5
-0.2
1.8
52.34
44.6

Associated Gene:

Gene:
PRKAG1

Ensembl Gene ID:

Chromosome:
PEDO01006997.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

16299 - 19903
3605

16299 - 19903
3605

16299 - 19903
3605