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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006997.1_18074_18164_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
18074 - 18164

Intron Length:
91

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACCCCCC

5'SS Class:
major

3'SS Sequence:
CCTGCCCCCGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCCCAT

U12 Branch Point Sequence:
CCTTCCCCATCC

Flanking Amino Acid:
KPLVCISPNASLFDAVSSLI

Intron Amino Acid Position:
178

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
63.8
0.33
1.3
51.8
45.5

Major BPS
59.7
0.24
1.3
68.6
38.9

Major PPT
68.8
0.42
0.8
61.6
29

Minor 5ss
43.6
-0.7
3.1
60.9
43.6

Minor BPS
45.9
-0.3
2.1
59.12
45.7

Associated Gene:

Gene:
PRKAG1

Ensembl Gene ID:

Chromosome:
PEDO01006997.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

16299 - 19903
3605