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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006997.1_18544_18624_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
18544 - 18624

Intron Length:
81

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTGAGCGAG

5'SS Class:
major

3'SS Sequence:
GCCTGCCCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTCAC

U12 Branch Point Sequence:
CTCTGCTCACCC

Flanking Amino Acid:
AVGQQEAEFCGHADHHRLHQ

Intron Amino Acid Position:
215

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.1
0.57
1
59.3
41.8

Major BPS
69.8
0.49
1.1
71.3
36.7

Major PPT
64.6
0.33
0.9
53.9
36.6

Minor 5ss
29.8
-2.3
3.2
29
43.5

Minor BPS
45.4
-0.3
2.2
57.93
47.1

Associated Gene:

Gene:
PRKAG1

Ensembl Gene ID:

Chromosome:
PEDO01006997.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

16299 - 19903
3605

16299 - 19903
3605

16299 - 19903
3605