Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006997.1_31922_32068_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

31922 - 32068

Intron Length:

147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCGCC

5'SS Class:

major

3'SS Sequence:

CCCCCCGTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAG

U12 Branch Point Sequence:

TTTTTTTTCCCC

Flanking Amino Acid:

DLVFSDSSPQAVWNRIIEPV

Intron Amino Acid Position:

5021

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

60.2

39.4

Major BPS

45.3

-0.3

1.7

51.1

46.3

Major PPT

61.2

0.25

56.2

33.5

Minor 5ss

31.7

-2.1

3.2

41.8

Minor BPS

44.1

-0.4

3.6

72.92

38.9

Associated Gene:

Gene:

KMT2D

Ensembl Gene ID:

ENSAPLG00000029981

Chromosome:

PEDO01006997.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032026

29904 - 54204

24301

ENSAPLT00000026084

29904 - 54204

24301

ENSAPLT00000017431

29904 - 54204

24301

ENSAPLT00000039660

29904 - 54204

24301