Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006997.1_46592_46754_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46592 - 46754

Intron Length:

163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

TGGTGCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

CCCTGCTGAAGC

Flanking Amino Acid:

DRRDPPVHPRGDDSTDGSAT

Intron Amino Acid Position:

1434

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.8

43.8

Major BPS

0.42

1.1

57.3

41.7

Major PPT

66.5

0.37

1.1

61.7

44.4

Minor 5ss

33.3

-1.9

2.8

39.7

45.9

Minor BPS

44.1

-0.4

2.1

50.11

46.6

Associated Gene:

Gene:

KMT2D

Ensembl Gene ID:

ENSAPLG00000029981

Chromosome:

PEDO01006997.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032026

29904 - 54204

24301

ENSAPLT00000026084

29904 - 54204

24301

ENSAPLT00000017431

29904 - 54204

24301

ENSAPLT00000039660

29904 - 54204

24301