Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006997.1_46945_47070_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46945 - 47070

Intron Length:

126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGGGG

5'SS Class:

major

3'SS Sequence:

CCTCCTCGGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACCGAC

U12 Branch Point Sequence:

TTCTCCTCCTCC

Flanking Amino Acid:

LEDMFPPYLQEAFFGKALMD

Intron Amino Acid Position:

1371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

54.8

44.4

Major BPS

45.5

-0.2

1.1

39.5

31.1

Major PPT

63.3

0.3

38.7

Minor 5ss

21.8

-3.3

3.4

28.2

Minor BPS

40.4

-0.7

3.6

66.27

45.4

Associated Gene:

Gene:

KMT2D

Ensembl Gene ID:

ENSAPLG00000029981

Chromosome:

PEDO01006997.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017431

29904 - 54204

24301

ENSAPLT00000039660

29904 - 54204

24301

ENSAPLT00000032026

29904 - 54204

24301

ENSAPLT00000026084

29904 - 54204

24301