Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006997.1_48025_48104_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

48025 - 48104

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACACGCG

5'SS Class:

major

3'SS Sequence:

TTTGTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGGTCAC

U12 Branch Point Sequence:

GGTCACGCACCC

Flanking Amino Acid:

SEISAKAKEPEPQYFRFEGV

Intron Amino Acid Position:

1170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.1

54.1

43.4

Major BPS

-0

1.3

52.4

43.3

Major PPT

79.6

0.67

0.8

74.1

31.1

Minor 5ss

34.9

-1.7

3.5

47.7

Minor BPS

36.6

-1

2.3

47.01

41.4

Associated Gene:

Gene:

KMT2D

Ensembl Gene ID:

ENSAPLG00000029981

Chromosome:

PEDO01006997.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032026

29904 - 54204

24301

ENSAPLT00000026084

29904 - 54204

24301

ENSAPLT00000017431

29904 - 54204

24301

ENSAPLT00000039660

29904 - 54204

24301