Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006997.1_49110_49321_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

49110 - 49321

Intron Length:

212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CCAACACCCCCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

CCCCCCCCAACA

Flanking Amino Acid:

CYHPYCVNSKITKVMLLKGW

Intron Amino Acid Position:

1003

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

52.1

0.05

1.3

41.8

Major PPT

58.4

0.19

0.9

47.2

35.3

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

46.1

-0.3

1.9

53.63

44.5

Associated Gene:

Gene:

KMT2D

Ensembl Gene ID:

ENSAPLG00000029981

Chromosome:

PEDO01006997.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032026

29904 - 54204

24301

ENSAPLT00000026084

29904 - 54204

24301

ENSAPLT00000017431

29904 - 54204

24301

ENSAPLT00000039660

29904 - 54204

24301