About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006997.1_49628_50045_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
49628 - 50045

Intron Length:
418

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCA|GTAAGGCTG

5'SS Class:
major

3'SS Sequence:
GCTCTACCCGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCTGAG

U12 Branch Point Sequence:
TTGCCCTGAGCC

Flanking Amino Acid:
STTSSVDTLALADVESSPSK

Intron Amino Acid Position:
969

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69
0.45
1.1
58.4
46.1

Major BPS
47
-0.1
1.5
42.6
40.4

Major PPT
69.4
0.44
0.9
62.3
33.5

Minor 5ss
36.6
-1.5
3.5
53.2
44.6

Minor BPS
56.7
0.19
1.7
69.23
41.8

Associated Gene:

Gene:
KMT2D

Ensembl Gene ID:

Chromosome:
PEDO01006997.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

29904 - 54204
24301

29904 - 54204
24301

29904 - 54204
24301