Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006997.1_50160_50393_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

50160 - 50393

Intron Length:

234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGGG

5'SS Class:

major

3'SS Sequence:

CCCTTGGCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

CTTGCTGTAACC

Flanking Amino Acid:

SSPGRSRVKQGRSSSFPGRR

Intron Amino Acid Position:

931

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

58.9

Major BPS

62.2

0.3

1.2

38.7

Major PPT

61.8

0.27

0.9

53.1

36.7

Minor 5ss

27.5

-2.6

3.6

37.8

Minor BPS

54.2

0.11

2.1

69.26

Associated Gene:

Gene:

KMT2D

Ensembl Gene ID:

ENSAPLG00000029981

Chromosome:

PEDO01006997.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032026

29904 - 54204

24301

ENSAPLT00000026084

29904 - 54204

24301

ENSAPLT00000039660

29904 - 54204

24301