Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01006997.1_74164_74328_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

74164 - 74328

Intron Length:

165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTAAGTTCC

5'SS Class:

major

3'SS Sequence:

GTCCCTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAC

U12 Branch Point Sequence:

GGGGCTGGAACT

Flanking Amino Acid:

DDEDAAVNRIALGMCTFTLA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.3

66.7

40.1

Major BPS

64.8

0.37

0.9

55.1

32.8

Major PPT

76.1

0.59

0.8

69.4

31.3

Minor 5ss

42.4

-0.8

2.7

49.6

39.8

Minor BPS

43.3

-0.4

2.1

57.9

44.9

Associated Gene:

Gene:

LMBR1L

Ensembl Gene ID:

ENSAPLG00000009662

Chromosome:

PEDO01006997.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023099

71313 - 76954

5642

ENSAPLT00000010093

71502 - 76954

5453