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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007020.1_1125_1536_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1125 - 1536

Intron Length:

412

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCCTGAGCC

5'SS Class:

major

3'SS Sequence:

CCGGAGGGCAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAATCAC

U12 Branch Point Sequence:

CAGCCGGTAATC

Flanking Amino Acid:

GPAGLSRGREGVTPRPRGDG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.8

0.26

1.3

60.2

39.9

Major BPS

70.5

0.51

33.1

Major PPT

43.9

-0.3

1.1

31.3

34.7

Minor 5ss

22.4

-3.2

3.8

25.8

36.5

Minor BPS

40.6

-0.7

2.5

48.25

42.1

Associated Gene:

Gene:

BARX1

Ensembl Gene ID:

ENSAPLG00000027808

Chromosome:

PEDO01007020.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046613

42 - 1628

1587