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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007020.1_207_533_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

207 - 533

Intron Length:

327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

CCCCGCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTACT

U12 Branch Point Sequence:

TGCTCCCTCCCC

Flanking Amino Acid:

QNRRMKWKKIVLQGGGLESP

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

69.9

Major BPS

39.4

-0.6

4.3

34.5

Major PPT

67.6

0.4

0.8

60.3

29.5

Minor 5ss

35.8

-1.6

3.2

46.7

36.7

Minor BPS

37.1

-1

3.7

59.65

45.4

Associated Gene:

Gene:

BARX1

Ensembl Gene ID:

ENSAPLG00000027808

Chromosome:

PEDO01007020.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046613

42 - 1628

1587