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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007020.1_619_734_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

619 - 734

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCAG

5'SS Class:

major

3'SS Sequence:

CTCTCTCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

TGGGTCTCACCG

Flanking Amino Acid:

EKQKYLSTPDRIDLAESLGL

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

60.5

45.8

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

77.9

0.63

0.7

72.8

25.4

Minor 5ss

28.7

-2.4

3.4

37.1

47.5

Minor BPS

44.1

-0.5

1.9

47.42

45.8

Associated Gene:

Gene:

BARX1

Ensembl Gene ID:

ENSAPLG00000027808

Chromosome:

PEDO01007020.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046613

42 - 1628

1587