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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007031.1_1098_1340_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1098 - 1340

Intron Length:

243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCCG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCCCAC

U12 Branch Point Sequence:

GCTTCGTGCACC

Flanking Amino Acid:

KLAKPYSRPELTDYINASFM

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

62.3

43.9

Major BPS

46.4

-0.2

1.2

52.1

34.1

Major PPT

0.83

0.7

81.7

23.1

Minor 5ss

32.7

-2

39.3

46.1

Minor BPS

44.6

-0.4

2.5

59.68

45.2

Associated Gene:

Gene:

PTPN9

Ensembl Gene ID:

ENSAPLG00000027258

Chromosome:

PEDO01007031.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041782

21 - 5104

5084