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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007031.1_3149_3795_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3149 - 3795

Intron Length:

647

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCTGCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

GCTGGCTGATGC

Flanking Amino Acid:

LFYLLDRAVESFETQRNGLV

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.8

43.8

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

64.4

0.33

0.9

56.1

33.6

Minor 5ss

33.3

-1.9

2.8

39.7

45.9

Minor BPS

37.1

-1

2.2

43.17

44.3

Associated Gene:

Gene:

PTPN9

Ensembl Gene ID:

ENSAPLG00000027258

Chromosome:

PEDO01007031.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041782

21 - 5104

5084