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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007031.1_534_809_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

534 - 809

Intron Length:

276

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAC

U12 Branch Point Sequence:

CCAGTGTCACCT

Flanking Amino Acid:

QNVLVIVMTTRLEEGGRRKC

Intron Amino Acid Position:

441

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

Major BPS

57.2

0.18

1.4

63.1

44.5

Major PPT

73.4

0.53

0.8

64.8

30.7

Minor 5ss

28.1

-2.5

3.1

35.3

41.4

Minor BPS

36.4

-0.9

2.2

47.41

45.4

Associated Gene:

Gene:

PTPN9

Ensembl Gene ID:

ENSAPLG00000027258

Chromosome:

PEDO01007031.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041782

21 - 5104

5084