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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007031.1_889_1027_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

889 - 1027

Intron Length:

139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGGGGT

5'SS Class:

major

3'SS Sequence:

GCCGTCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

CCGTCCTGACGC

Flanking Amino Acid:

KQRNTYIGTQGPLENTYGDF

Intron Amino Acid Position:

415

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

63.9

42.4

Major BPS

68.9

0.47

59.2

39.1

Major PPT

0.34

0.9

56.9

33.6

Minor 5ss

25.1

-2.9

3.4

43.5

Minor BPS

44.6

-0.4

50.23

46.5

Associated Gene:

Gene:

PTPN9

Ensembl Gene ID:

ENSAPLG00000027258

Chromosome:

PEDO01007031.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041782

21 - 5104

5084