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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007042.1_754_1999_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

754 - 1999

Intron Length:

1246

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCCCGCTCC

5'SS Class:

weak_major

3'SS Sequence:

GGCTGTGACACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

GGTGCCGTGACA

Flanking Amino Acid:

SWGPAGSCSVGAVIPSAQRR

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.8

0.23

1.3

52.4

42.8

Major BPS

0.22

1.2

52.4

43.3

Major PPT

56.9

0.16

1.1

49.1

43.2

Minor 5ss

28.7

-2.4

34.1

41.6

Minor BPS

49.5

-0

2.2

63.88

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021321

Chromosome:

PEDO01007042.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036770

270 - 2267

1998