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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007055.1_2484_2573_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
2484 - 2573

Intron Length:
90

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGGGGAGC

5'SS Class:
major

3'SS Sequence:
CCTACCTCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GACTCAC

U12 Branch Point Sequence:
TTCCCCCTACCT

Flanking Amino Acid:
GLSSILCSLNRHYQHSCWLL

Intron Amino Acid Position:
58

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.3
0.6
1
63.9
42.4

Major BPS
59.5
0.24
1.2
63.3
35.6

Major PPT
70.8
0.47
0.8
61.3
34.9

Minor 5ss
25.8
-2.8
3.2
33.4
42.1

Minor BPS
55.1
0.24
2
78.29
43.7

Associated Gene:

Gene:
TMEM269

Ensembl Gene ID:

Chromosome:
PEDO01007055.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 4344
4324