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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007083.1_642_1198_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

642 - 1198

Intron Length:

557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCGC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTGCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAG

U12 Branch Point Sequence:

GCTCTGAGAACT

Flanking Amino Acid:

LLDWHSNAYPREVLGHPEIG

Intron Amino Acid Position:

207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

63.9

42.4

Major BPS

55.1

0.13

1.5

54.7

43.1

Major PPT

0.5

0.9

64.8

36.5

Minor 5ss

25.7

-2.8

3.1

32.8

42.2

Minor BPS

41.2

-0.5

2.2

59.74

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023887

Chromosome:

PEDO01007083.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019943

21 - 4059

4039