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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007124.1_1301_1639_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1301 - 1639

Intron Length:

339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGATGG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAC

U12 Branch Point Sequence:

TCACTCTTAACT

Flanking Amino Acid:

RTYLEIEQLQLEIQNASSLS

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

68.5

39.2

Major BPS

77.1

0.67

77.9

32.2

Major PPT

86.2

0.81

0.7

80.7

24.5

Minor 5ss

31.9

-2.1

38.5

46.6

Minor BPS

74.5

0.85

1.2

81.99

39.2

Associated Gene:

Gene:

CHPF

Ensembl Gene ID:

ENSAPLG00000003255

Chromosome:

PEDO01007124.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043337

21 - 2392

2372

ENSAPLT00000008326

95 - 1723

1629

ENSAPLT00000003306

53 - 2407

2355