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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007124.1_80_268_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

80 - 268

Intron Length:

189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTGTGAGCC

5'SS Class:

weak_major

3'SS Sequence:

CGCGGGGGCTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

GGAGCCTCACGC

Flanking Amino Acid:

GAVGLNGASGCCPSRRTRY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.1

0.15

1.1

48.6

34.1

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

48.8

-0

1.1

Minor 5ss

34.3

-1.8

3.3

44.2

Minor BPS

40.5

-0.7

44.92

42.9

Associated Gene:

Gene:

CHPF

Ensembl Gene ID:

ENSAPLG00000003255

Chromosome:

PEDO01007124.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003306

53 - 2407

2355