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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007124.1_854_1117_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

854 - 1117

Intron Length:

264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CATGCTGACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TCGGCCGTAACC

Flanking Amino Acid:

TAVSCTEEHEGLLYQYFELG

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

71.4

40.3

Major BPS

66.3

0.4

1.1

41.8

Major PPT

60.5

0.24

53.3

40.4

Minor 5ss

-2.3

3.1

41.6

Minor BPS

53.4

0.09

2.2

65.47

46.4

Associated Gene:

Gene:

CHPF

Ensembl Gene ID:

ENSAPLG00000003255

Chromosome:

PEDO01007124.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003306

53 - 2407

2355

ENSAPLT00000043337

21 - 2392

2372

ENSAPLT00000008326

95 - 1723

1629