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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007153.1_5209_6014_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5209 - 6014

Intron Length:

806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGAGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCCTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAC

U12 Branch Point Sequence:

ACTGCCTCAATG

Flanking Amino Acid:

ESTQLQFYNKVRTRGSIKRR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.4

43.3

Major BPS

74.1

0.6

66.7

39.9

Major PPT

70.8

0.47

37.9

Minor 5ss

32.6

-2

3.5

48.3

47.5

Minor BPS

54.3

-0

1.7

57.67

44.4

Associated Gene:

Gene:

RCSD1

Ensembl Gene ID:

ENSAPLG00000025477

Chromosome:

PEDO01007153.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040814

1602 - 6503

4902

ENSAPLT00000031601

1602 - 6503

4902