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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007174.1_352_1039_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

352 - 1039

Intron Length:

688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCCTGAGC

5'SS Class:

weak_major

3'SS Sequence:

TCCGTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGACAC

U12 Branch Point Sequence:

CCCCCCAGGACA

Flanking Amino Acid:

TRAQPQAPNKGPSPMQGCRR

Intron Amino Acid Position:

540

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.6

0.11

1.4

51.7

45.2

Major BPS

43.6

-0.4

1.1

44.2

38.7

Major PPT

68.1

0.41

0.9

61.2

35.1

Minor 5ss

-2.6

3.1

35.5

40.6

Minor BPS

44.4

-0.4

1.8

49.52

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018026

Chromosome:

PEDO01007174.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031041

21 - 5219

5199