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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007174.1_7642_7904_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7642 - 7904

Intron Length:

263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCCC

5'SS Class:

strong_major

3'SS Sequence:

CTGTGCCACGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCCCCCTCACCA

Flanking Amino Acid:

LGLLSLPSLPGVQANKCPKG

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

65.8

40.2

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

64.8

0.33

58.4

37.4

Minor 5ss

33.7

-1.9

42.6

44.4

Minor BPS

46.5

-0.2

1.9

52.44

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017366

Chromosome:

PEDO01007174.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037296

5420 - 8864

3445