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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007194.1_1196_1293_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1196 - 1293

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTGAGTGCT

5'SS Class:

major

3'SS Sequence:

GTTCCCCGGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAT

U12 Branch Point Sequence:

GTCCCCCTATGT

Flanking Amino Acid:

GAVPEPRPGSCITDSSRRKG

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.3

66.2

39.6

Major BPS

63.8

0.34

1.2

54.7

43.1

Major PPT

62.4

0.28

1.1

58.1

38.4

Minor 5ss

31.7

-2.1

3.3

46.2

42.2

Minor BPS

44.3

-0.3

2.1

62.91

46.6

Associated Gene:

Gene:

SEMA4G

Ensembl Gene ID:

ENSAPLG00000004215

Chromosome:

PEDO01007194.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032106

60 - 3069

3010

ENSAPLT00000004316

21 - 3069

3049

ENSAPLT00000039106

181 - 3320

3140