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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007194.1_1949_2032_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1949 - 2032

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGACA

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

GGGCGCTGACCC

Flanking Amino Acid:

RACRDTANRDSTGLVQDVQG

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.3

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

74.8

0.56

0.8

68.9

31.6

Minor 5ss

31.2

-2.2

3.3

40.2

45.7

Minor BPS

-0.7

46.36

Associated Gene:

Gene:

SEMA4G

Ensembl Gene ID:

ENSAPLG00000004215

Chromosome:

PEDO01007194.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032106

60 - 3069

3010

ENSAPLT00000004316

21 - 3069

3049

ENSAPLT00000039106

181 - 3320

3140