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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01007194.1_662_793_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

662 - 793

Intron Length:

132

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

GCTTGCCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAACAC

U12 Branch Point Sequence:

CACTCTGCAACA

Flanking Amino Acid:

RVARVARVCKSDVGGKKILQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

38.2

Major BPS

52.3

0.06

1.1

61.1

34.5

Major PPT

77.9

0.63

0.9

73.4

37.1

Minor 5ss

27.4

-2.6

3.5

36.8

47.7

Minor BPS

45.8

-0.3

2.2

56.04

43.5

Associated Gene:

Gene:

SEMA4G

Ensembl Gene ID:

ENSAPLG00000004215

Chromosome:

PEDO01007194.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032106

60 - 3069

3010

ENSAPLT00000004316

21 - 3069

3049

ENSAPLT00000039106

181 - 3320

3140